CRE ID : FCMM_49964

CRE Name : cp1@Msx2

Genomic Position
chr13 : 53472590 .. 53472980
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
NM_013601.2, AK133846, AK131974, BC141132, HQ260699
Nearest transcript distance
0
Promoter GeneID
17702
Promoter HGNC ID/MGI ID
MGI:97169
Promoter UniProt ID
G3DRA8
Promoter Gene Names
msh homeobox 2
Promoter Gene Symbols
Msx2
Promoter Gene Synonyms
Hox-8, Hox8, Hox8.1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:53568081..53568094,-;mm_116792.1
name: p3@Msx2
id: mm9::chr13:53568104..53568156,-;mm_116793.1
name: p1@Msx2
id: mm9::chr13:53568169..53568179,-;mm_116794.1
name: p4@Msx2
id: mm9::chr13:53568191..53568219,-;mm_116795.1
name: p2@Msx2

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1007292
type: pELS
id: EM10E1360106
type: pELS
Overlapped SilencerDB Silencers
MS_01341008 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2