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CRE ID : FCMM_49964
CRE Name : cp1@Msx2
Annotations
Bound TFs (ChIP-Atlas)
Expression
Download Annotation JSON
Genomic Position
chr13 : 53472590 .. 53472980
Organism
Mouse (GRCm38/mm10)
Promoter/TSS Annotation
Nearest transcript IDs
NM_013601.2, AK133846, AK131974, BC141132, HQ260699
Nearest transcript distance
0
Promoter GeneID
17702
Promoter HGNC ID/MGI ID
MGI:97169
Promoter UniProt ID
G3DRA8
Promoter Gene Names
msh homeobox 2
Promoter Gene Symbols
Msx2
Promoter Gene Synonyms
Hox-8, Hox8, Hox8.1
Overlapped FANTOM5 CAGE Peaks
id:
mm9::chr13:53568081..53568094,-;mm_116792.1
name:
p3@Msx2
id:
mm9::chr13:53568104..53568156,-;mm_116793.1
name:
p1@Msx2
id:
mm9::chr13:53568169..53568179,-;mm_116794.1
name:
p4@Msx2
id:
mm9::chr13:53568191..53568219,-;mm_116795.1
name:
p2@Msx2
Overlapped refTSS TSSs
rfmm_124102.1
rfmm_124103.1
rfmm_124104.1
rfmm_124105.1
Enhancer Annotation
Overlapped FANTOM5 Enhancers
CRE Annotation
Overlapped SCREEN cCREs
id:
EM10E1007292
type:
pELS
id:
EM10E1360106
type:
pELS
Overlapped SilencerDB Silencers
MS_01341008
(Embryonic stem cell)
Overlapped VISTA Enhancers
External Links
MoG+
UCSC Genome Browser