CRE ID : FCHS_301293

CRE Name : cp12@SOX2-OT

Genomic Position
chr3 : 181056293 .. 181056744
Organism
Human (GRCh38/hg38)

Promoter/TSS Annotation

Nearest transcript IDs
ENST00000693697.2, ENST00000691318.2, ENST00000736124.1, ENST00000493521.5, ENST00000736130.1, ENST00000736127.1, ENST00000736122.1, ENST00000647179.1, ENST00000460739.6, ENST00000665485.1, NR_075092.1, NR_075091.1, JQ408703
Nearest transcript distance
0
Promoter GeneID
347689
Promoter HGNC ID/MGI ID
HGNC:20209
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript
Promoter Gene Symbols
SOX2-OT
Promoter Gene Synonyms
DKFZp761J1324, NCRNA00043
Overlapped FANTOM5 CAGE Peaks
id: hg19::chr3:180774377..180774390,+;hg_39972.1
name: p33@SOX2-OT
id: hg19::chr3:180774464..180774477,+;hg_39973.1
name: p10@SOX2-OT
Overlapped refTSS TSSs

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EH38E3556508
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers
hs192 (Forebrain)

External Links

TogoVar UCSC Genome Browser
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JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.1 , Website version: v2.0.29-beta.2