CRE ID : FCHS_301342

CRE Name : cp17@SOX2-OT

Genomic Position
chr3 : 181701800 .. 181702190
Organism
Human (GRCh38/hg38)

Promoter/TSS Annotation

Nearest transcript IDs
ENST00000627738.1
Nearest transcript distance
-373
Promoter GeneID
347689
Promoter HGNC ID/MGI ID
HGNC:20209
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript
Promoter Gene Symbols
SOX2-OT
Promoter Gene Synonyms
DKFZp761J1324, NCRNA00043
Overlapped FANTOM5 CAGE Peaks
Overlapped refTSS TSSs

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EH38E2262641
type: pELS
id: EH38E3556662
type: pELS
id: EH38E3556663
type: pELS
Overlapped SilencerDB Silencers
HS_00048722 (Mammary gland)
HS_00048723 (Mesenchymal stem cell)
HS_00048724 (Hematopoietic stem cell)
HS_00048725 (Prepuce)
Overlapped VISTA Enhancers

External Links

TogoVar UCSC Genome Browser
fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1