CRE ID : FCMM_1002

CRE Name : cp3@Alyreffm1,cp1@Dnaaf6,cp1@Dnaaf6rt

Genomic Position
chr1 : 31222532 .. 31222848
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000233331.1, ENSMUST00000187892.7, ENSMUST00000127775.7, ENSMUST00000187659.6, ENSMUST00000135245.2, ENSMUST00000027230.2, NR_033445.1, NM_029062.2, AK016483, BC147514, BC147546, BC172083, AK162175, AK016212, AK015858, BC107262
Nearest transcript distance
0
Promoter GeneID
70988, 74708
Promoter HGNC ID/MGI ID
MGI:1918238, MGI:1921958, MGI:3607720
Promoter UniProt ID
A0A087WNP0, B7ZWJ4, Q3KNI6, Q9D4S9
Promoter Gene Names
Aly/REF export factor family member 1, dynein axonemal assembly factor 6, dynein axonemal assembly factor 6, retrotransposed
Promoter Gene Symbols
Alyreffm1, Dnaaf6, Dnaaf6rt
Promoter Gene Synonyms
4930521A18Rik, 4931428L18Rik, Dnaaf6, Dnaaf6b, E230019M04Rik, Pih1d3, Pih1h3b
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:31279449..31279465,-;mm_5389.1
name: p3@4931428L18Rik
id: mm9::chr1:31279472..31279488,-;mm_5390.1
name: p2@4931428L18Rik
id: mm9::chr1:31279489..31279522,-;mm_5391.1
name: p1@4931428L18Rik
id: mm9::chr1:31279627..31279637,+;mm_349.1
name: p2@Dnaaf6
id: mm9::chr1:31279653..31279666,+;mm_350.1
name: p1@Dnaaf6

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0433445
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1