CRE ID : FCMM_1165

CRE Name : cp1@Ccdc115,cp1@Imp4

Genomic Position
chr1 : 34439655 .. 34440068
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000042493.9, ENSMUST00000027303.13, ENSMUST00000187077.1, ENSMUST00000137794.7, ENSMUST00000149962.7, ENSMUST00000134327.1, ENSMUST00000128086.1, ENSMUST00000136770.2, NM_027159.2, BC019430, AK151176, AK152214, AK008178, AK010504, AK018039, AK166903, AK084933, AK013334, BC069930, AF334609, AK004135, BC037602
Nearest transcript distance
0
Promoter GeneID
27993, 69668
Promoter HGNC ID/MGI ID
MGI:106572, MGI:1916918
Promoter UniProt ID
D6RCI8, F6VY64, Q8VE99, Q8VHZ7
Promoter Gene Names
IMP4, U3 small nucleolar ribonucleoprotein, coiled-coil domain containing 115
Promoter Gene Symbols
Ccdc115, Imp4
Promoter Gene Synonyms
2310061I09Rik, Ccp1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:34496700..34496755,+;mm_421.1
name: p1@Imp4
Overlapped refTSS TSSs
rfmm_883.1
rfmm_884.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0433829
type: PLS
id: EM10E1238597
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2