CRE ID : FCMM_1168

CRE Name : cp3@Ptpn18

Genomic Position
chr1 : 34459544 .. 34459859
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000185610.1, ENSMUST00000027302.13, ENSMUST00000190122.1, ENSMUST00000188884.2, NM_011206.2, U52523, AK144353, U35124, U49853, BC008512
Nearest transcript distance
0
Promoter GeneID
19253
Promoter HGNC ID/MGI ID
MGI:108410
Promoter UniProt ID
A0A087WPR5, Q61152
Promoter Gene Names
protein tyrosine phosphatase, non-receptor type 18
Promoter Gene Symbols
Ptpn18
Promoter Gene Synonyms
FLP1, HSCF, PTP-HSCF, PTP-K1, Ptpk1
Overlapped FANTOM5 CAGE Peaks
id: mm10::chr1:34459724..34459740,+;mm_162299.1
name: p6@Ptpn18
id: mm9::chr1:34516601..34516659,+;mm_425.1
name: p2@Ptpn18
Overlapped refTSS TSSs
rfmm_888.1
rfmm_889.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1238601
type: PLS
Overlapped SilencerDB Silencers
MS_01323600 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

MoG+ UCSC Genome Browser
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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1