CRE ID : FCMM_1171

CRE Name : cp1@Ptpn18

Genomic Position
chr1 : 34472475 .. 34472934
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000188972.2, AK014043
Nearest transcript distance
0
Promoter GeneID
19253
Promoter HGNC ID/MGI ID
MGI:108410
Promoter UniProt ID
Q3V441
Promoter Gene Names
protein tyrosine phosphatase, non-receptor type 18
Promoter Gene Symbols
Ptpn18
Promoter Gene Synonyms
FLP1, HSCF, PTP-HSCF, PTP-K1, Ptpk1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:34529559..34529602,+;mm_426.1
name: p1@Ptpn18
id: mm9::chr1:34529610..34529617,+;mm_427.1
name: p4@Ptpn18
id: mm9::chr1:34529626..34529637,+;mm_428.1
name: p3@Ptpn18
Overlapped refTSS TSSs
rfmm_890.1
rfmm_891.1
rfmm_892.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1238605
type: PLS
Overlapped SilencerDB Silencers
MS_01323601 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1