CRE ID : FCMM_118247

CRE Name : cp5@Sox2ot

Genomic Position
chr3 : 34104182 .. 34104519
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000198032.1, ENSMUST00000196793.4, ENSMUST00000196243.4
Nearest transcript distance
0
Promoter GeneID
Promoter HGNC ID/MGI ID
MGI:2444112
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding)
Promoter Gene Symbols
Sox2ot
Promoter Gene Synonyms
B230215L15Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr3:34003359..34003369,+;mm_23004.1
name: p11@Sox2ot
id: mm9::chr3:34003370..34003397,+;mm_23005.1
name: p7@Sox2ot
id: mm9::chr3:34003403..34003418,+;mm_23006.1
name: p5@Sox2ot

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1107745
type: dELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers
hs192 (Forebrain)

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1