CRE ID : FCMM_118251

CRE Name : cp1@Sox2ot

Genomic Position
chr3 : 34196480 .. 34197014
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000196058.4, ENSMUST00000200625.1
Nearest transcript distance
0
Promoter GeneID
Promoter HGNC ID/MGI ID
MGI:2444112
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding)
Promoter Gene Symbols
Sox2ot
Promoter Gene Synonyms
B230215L15Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr3:34095664..34095678,+;mm_23008.1
name: p4@Sox2ot
id: mm9::chr3:34095699..34095712,+;mm_23009.1
name: p8@Sox2ot
id: mm9::chr3:34095844..34095855,+;mm_23010.1
name: p9@Sox2ot

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0726965
type: PLS
id: EM10E0726966
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1