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CRE ID : FCMM_118265
CRE Name : cp10@Sox2ot
Annotations
Bound TFs (ChIP-Atlas)
Expression
Download Annotation JSON
Genomic Position
chr3 : 34559845 .. 34560418
Organism
Mouse (GRCm38/mm10)
Promoter/TSS Annotation
Nearest transcript IDs
ENSMUST00000200414.4, ENSMUST00000197977.4, ENSMUST00000198170.4, ENSMUST00000196795.1, NR_015580.2, BC057611
Nearest transcript distance
0
Promoter GeneID
320478
Promoter HGNC ID/MGI ID
MGI:2444112
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding)
Promoter Gene Symbols
Sox2ot
Promoter Gene Synonyms
B230215L15Rik
Overlapped FANTOM5 CAGE Peaks
id:
mm9::chr3:34459116..34459125,+;mm_23013.1
name:
p12@Sox2ot
id:
mm9::chr3:34459134..34459146,+;mm_23014.1
name:
p6@Sox2ot
id:
mm9::chr3:34459266..34459272,+;mm_23015.1
name:
p3@Gm27403
id:
mm9::chr3:34459282..34459308,+;mm_23016.1
name:
p1@Sox2ot
Overlapped refTSS TSSs
rfmm_25420.1
rfmm_25421.1
rfmm_25422.1
rfmm_25423.1
Enhancer Annotation
Overlapped FANTOM5 Enhancers
CRE Annotation
Overlapped SCREEN cCREs
id:
EM10E0727018
type:
PLS
id:
EM10E0727019
type:
PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers
External Links
MoG+
UCSC Genome Browser