CRE ID : FCMM_118271

CRE Name : cp1@Mir1897,cp9@Sox2ot

Genomic Position
chr3 : 34637700 .. 34638534
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000197103.1, ENSMUST00000199171.4, ENSMUST00000200092.1, ENSMUST00000198006.1, ENSMUST00000197258.1, NR_035433.1, AK031919, AK039272
Nearest transcript distance
0
Promoter GeneID
100316679, 320478
Promoter HGNC ID/MGI ID
MGI:2444112, MGI:3811407
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding), microRNA 1897
Promoter Gene Symbols
Mir1897, Sox2ot
Promoter Gene Synonyms
B230215L15Rik, Mirn1897, mmu-mir-1897
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr3:34537138..34537150,+;mm_23022.1
name: p3@Sox2ot
id: mm9::chr3:34537243..34537264,+;mm_23023.1
name: p2@Sox2ot
id: mm9::chr3:34537266..34537293,+;mm_23024.1
name: mm_23024.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0727030
type: pELS
id: EM10E0727031
type: PLS
id: EM10E1107797
type: PLS
Overlapped SilencerDB Silencers
MS_01327003 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1