CRE ID : FCMM_118280

CRE Name : cp2@Sox2

Genomic Position
chr3 : 34649533 .. 34650195
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
NM_011443.4, U31967, BC057574
Nearest transcript distance
0
Promoter GeneID
20674
Promoter HGNC ID/MGI ID
MGI:98364
Promoter UniProt ID
Promoter Gene Names
SRY (sex determining region Y)-box 2
Promoter Gene Symbols
Sox2
Promoter Gene Synonyms
Sox-2, lcc, ysb
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr3:34548646..34548657,-;mm_27183.1
name: mm_27183.1
id: mm9::chr3:34548678..34548691,-;mm_27184.1
name: mm_27184.1
id: mm9::chr3:34548769..34548797,-;mm_27185.1
name: mm_27185.1
id: mm9::chr3:34548845..34548856,+;mm_23027.1
name: p4@Sox2
id: mm9::chr3:34548909..34548927,+;mm_23028.1
name: p1@Sox2
id: mm9::chr3:34548946..34548972,+;mm_23029.1
name: p2@Sox2
id: mm9::chr3:34549096..34549111,+;mm_23030.1
name: p3@Sox2

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0727052
type: pELS
id: EM10E0727053
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1