CRE ID : FCMM_1279

CRE Name : cp1@Arid5a

Genomic Position
chr1 : 36307510 .. 36307925
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000126413.7, ENSMUST00000142319.7, ENSMUST00000150747.7, ENSMUST00000145179.7, ENSMUST00000124280.7, ENSMUST00000097778.8, ENSMUST00000116629.8, ENSMUST00000115031.7, ENSMUST00000115032.7, ENSMUST00000137906.1, ENSMUST00000192874.1, ENSMUST00000115029.1, ENSMUST00000140218.1, NM_001290727.1, NM_001172206.1, NM_145996.4, NM_001172205.1, NM_001290726.1, NR_033310.1, AK156934, AK157607, AK149839, AK156622, AK085015, AK156376, AK029237, AK150170, AK155555, AK170914, BC027152
Nearest transcript distance
0
Promoter GeneID
214855
Promoter HGNC ID/MGI ID
MGI:2443039
Promoter UniProt ID
D3Z085, D3Z0W0, D3Z7U1, J3KMU9, Q3U108
Promoter Gene Names
AT-rich interaction domain 5A
Promoter Gene Symbols
Arid5a
Promoter Gene Synonyms
D430024K22Rik, Mrf1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:36364572..36364580,+;mm_459.1
name: p2@Arid5a
id: mm9::chr1:36364590..36364608,+;mm_460.1
name: p1@Arid5a
id: mm9::chr1:36364619..36364624,+;mm_461.1
name: p3@Arid5a
Overlapped refTSS TSSs
rfmm_960.1
rfmm_961.1
rfmm_962.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0434288
type: PLS
id: EM10E0933942
type: pELS
Overlapped SilencerDB Silencers
MS_01323624 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1