CRE ID : FCMM_1327

CRE Name : cp1@D430040D24Rik,cp3@Sema4c

Genomic Position
chr1 : 36557357 .. 36557939
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000191642.5, ENSMUST00000195620.5, ENSMUST00000193382.5, ENSMUST00000194426.1, AK090073, AK173247, AK047283, AK052512
Nearest transcript distance
0
Promoter GeneID
20353, 319678
Promoter HGNC ID/MGI ID
MGI:109252, MGI:2442526
Promoter UniProt ID
A0A0A6YXK9, Q64151, Q69ZB9
Promoter Gene Names
RIKEN cDNA D430040D24 gene, sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
Promoter Gene Symbols
D430040D24Rik, Sema4c
Promoter Gene Synonyms
M-Sema_F, Semacl1, Semaf, Semai
Overlapped FANTOM5 CAGE Peaks
id: mm10::chr1:36557695..36557731,+;mm_162304.1
name: p1@D430040D24Rik
id: mm9::chr1:36614362..36614406,-;mm_5469.1
name: p2@Sema4c
Overlapped refTSS TSSs
rfmm_994.1
rfmm_995.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1239183
type: pELS
id: EM10E1239184
type: PLS
id: EM10E1239185
type: pELS
Overlapped SilencerDB Silencers
MS_01323629 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1