CRE ID : FCMM_1481

CRE Name : cp2@Gm26805,cp3@Lipt1,cp1@Tsga10

Genomic Position
chr1 : 37864681 .. 37865535
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000041815.14, ENSMUST00000239367.1, ENSMUST00000123082.8, ENSMUST00000155852.6, ENSMUST00000193669.1, ENSMUST00000181885.1, NM_207228.3, NM_001290720.1, BC066782, AK030254, AK170053, AK164954, AK163138, AK039030
Nearest transcript distance
0
Promoter GeneID
211484, 623661
Promoter HGNC ID/MGI ID
MGI:2685063, MGI:3645211, MGI:5477299
Promoter UniProt ID
Q3TDR6, Q3TR21, Q6NY15
Promoter Gene Names
lipoyltransferase 1, predicted gene, 26805, testis specific 10
Promoter Gene Symbols
Gm26805, Lipt1, Tsga10
Promoter Gene Synonyms
4933432N21Rik, EG623661, Mtsga10
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:37921646..37921658,-;mm_5522.1
name: p3@Tsga10
id: mm9::chr1:37921885..37921961,-;mm_5523.1
name: p1@Tsga10
id: mm9::chr1:37921973..37921984,-;mm_5524.1
name: p4@Tsga10
Overlapped refTSS TSSs
rfmm_1109.1
rfmm_1110.1
rfmm_1111.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0434947
type: pELS
id: EM10E0934298
type: pELS
id: EM10E0934300
type: PLS
id: EM10E1239659
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2