CRE ID : FCMM_1486

CRE Name : cp1@Mitd1,cp1@Mrpl30

Genomic Position
chr1 : 37890227 .. 37890621
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000139725.7, ENSMUST00000027257.9, ENSMUST00000138806.1, ENSMUST00000027256.11, ENSMUST00000193673.5, ENSMUST00000161694.1, ENSMUST00000160082.2, NM_001356262.1, NM_026913.3, BC020137, AK005342, AK171903, AK009074, AK089015, AK085466
Nearest transcript distance
0
Promoter GeneID
107734, 69028
Promoter HGNC ID/MGI ID
MGI:1333820, MGI:1916278
Promoter UniProt ID
Q8VDV8, Q9D7N6
Promoter Gene Names
MIT, microtubule interacting and transport, domain containing 1, mitochondrial ribosomal protein L30
Promoter Gene Symbols
Mitd1, Mrpl30
Promoter Gene Synonyms
1500032H18Rik, 2310001L22Rik, MRP-L28, Rpml28
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:37947155..37947169,-;mm_5525.1
name: p2@Mitd1
id: mm9::chr1:37947178..37947261,-;mm_5526.1
name: p1@Mitd1
id: mm9::chr1:37947364..37947387,+;mm_532.1
name: p1@Mrpl30
Overlapped refTSS TSSs
rfmm_1115.1
rfmm_1116.1
rfmm_1117.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0934314
type: pELS
id: EM10E0934315
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1