CRE ID : FCMM_1569

CRE Name : cp1@Pdcl3

Genomic Position
chr1 : 38987365 .. 38988009
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000193489.1, ENSMUST00000194552.1, NM_026850.4, AK168509, BC005601, AK078372, AK004334, AK169572
Nearest transcript distance
0
Promoter GeneID
68833
Promoter HGNC ID/MGI ID
MGI:1916083
Promoter UniProt ID
A0A0A6YVT6, A0A0A6YXV1
Promoter Gene Names
phosducin-like 3
Promoter Gene Symbols
Pdcl3
Promoter Gene Synonyms
1110061A19Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:39044611..39044624,+;mm_573.1
name: p3@Pdcl3
id: mm9::chr1:39044629..39044650,+;mm_574.1
name: p2@Pdcl3
id: mm9::chr1:39044651..39044672,+;mm_575.1
name: p1@Pdcl3
Overlapped refTSS TSSs
rfmm_1220.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0934490
type: pELS
id: EM10E1239978
type: pELS
id: EM10E1239979
type: dELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1