CRE ID : FCMM_1620

CRE Name : cp1@Tbc1d8

Genomic Position
chr1 : 39478544 .. 39479075
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000054462.10, ENSMUST00000192531.5, ENSMUST00000193823.1, NM_018775.4, NM_001357521.1, NM_001357522.1, AK141520, BC065081, AK141816, AK138630
Nearest transcript distance
0
Promoter GeneID
54610
Promoter HGNC ID/MGI ID
MGI:1927225
Promoter UniProt ID
A0A0A6YWY1, A0A0A6YXU3, Q9Z1A9
Promoter Gene Names
TBC1 domain family, member 8
Promoter Gene Symbols
Tbc1d8
Promoter Gene Synonyms
AD3, BUB2-like_protein_1, GRAM_domain, HBLP1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:39535525..39535578,-;mm_5573.1
name: p1@Tbc1d8
id: mm9::chr1:39535579..39535605,-;mm_5574.1
name: p2@Tbc1d8
id: mm9::chr1:39535693..39535712,+;mm_587.1
name: mm_587.1
Overlapped refTSS TSSs
rfmm_1236.1
rfmm_1237.1
rfmm_1238.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0934601
type: pELS
id: EM10E0934602
type: PLS
Overlapped SilencerDB Silencers
MS_01323662 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1