CRE ID : FCMM_1903

CRE Name : cp1@Gm20646,cp4@Pou3f3

Genomic Position
chr1 : 42694942 .. 42695392
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000239323.1, ENSMUST00000199521.4, ENSMUST00000176807.2
Nearest transcript distance
-17
Promoter GeneID
18993
Promoter HGNC ID/MGI ID
MGI:102564, MGI:5313093
Promoter UniProt ID
Promoter Gene Names
POU domain, class 3, transcription factor 3, predicted gene 20646
Promoter Gene Symbols
Gm20646, Pou3f3
Promoter Gene Synonyms
Brn-1, Brn1, Gm46091, HST011, Otf8, urehr2
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:42751738..42751787,+;mm_715.1
name: p1@Gm20646,p1@Gm46091,p6@Pou3f3
id: mm9::chr1:42751793..42751827,+;mm_716.1
name: p2@Gm20646,p7@Pou3f3
id: mm9::chr1:42751793..42751859,-;mm_5666.1
name: p4@Pantr1
id: mm9::chr1:42752036..42752049,-;mm_5667.1
name: p9@Pantr1
id: mm9::chr1:42752124..42752135,-;mm_5668.1
name: p8@Pantr1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0934977
type: PLS
Overlapped SilencerDB Silencers
MS_01323696 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1