CRE ID : FCMM_198

CRE Name : cp7@St18

Genomic Position
chr1 : 6729528 .. 6730206
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000043578.12, ENSMUST00000139756.7, ENSMUST00000131467.7, ENSMUST00000150761.7, ENSMUST00000151281.7, NM_173868.2, NR_045189.1, NR_045188.1, AB097467, AK032557, AJ536155, AK133743, BC118528, AK137440, AK141513
Nearest transcript distance
0
Promoter GeneID
240690
Promoter HGNC ID/MGI ID
MGI:2446700
Promoter UniProt ID
A0A0A6YXN3, A5LFV3, D3YUH3, Q148A0
Promoter Gene Names
suppression of tumorigenicity 18
Promoter Gene Symbols
St18
Promoter Gene Synonyms
Myt3, Nzf3
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:6720186..6720198,+;mm_76.1
name: p5@St18
id: mm9::chr1:6720205..6720215,+;mm_77.1
name: p9@St18
id: mm9::chr1:6720216..6720232,+;mm_78.1
name: p1@St18
Overlapped refTSS TSSs
rfmm_135.1
rfmm_136.1
rfmm_137.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0431447
type: pELS
id: EM10E0431448
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers
hs698 (Forebrain, Midbrain, Hindbrain, Neural tube, Dorsal root ganglion, Trigeminal V)

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2