CRE ID : FCMM_20

CRE Name : cp1@Sox17

Genomic Position
chr1 : 4493406 .. 4493867
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000192505.1, ENSMUST00000191939.1, BC148437, BC153021, BC060612, BC037521, BC027687
Nearest transcript distance
0
Promoter GeneID
20671
Promoter HGNC ID/MGI ID
MGI:107543
Promoter UniProt ID
A0A0A6YXV3, Q6P9T1
Promoter Gene Names
SRY (sex determining region Y)-box 17
Promoter Gene Symbols
Sox17
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:4483679..4483695,-;mm_5083.1
name: p1@Sox17
Overlapped refTSS TSSs
rfmm_17.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0932245
type: dELS
id: EM10E1235314
type: dELS
Overlapped SilencerDB Silencers
MS_01323414 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1