CRE ID : FCMM_2063

CRE Name : cp2@Tex30

Genomic Position
chr1 : 44102274 .. 44102692
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000027215.11, ENSMUST00000156392.7, ENSMUST00000128190.7, ENSMUST00000147571.7, ENSMUST00000133677.7, ENSMUST00000150911.7, ENSMUST00000129702.1, ENSMUST00000147661.7, ENSMUST00000143327.1, ENSMUST00000149502.7, NM_029368.2, NM_001356296.1, NM_001356297.1, AK160565, BC116881, BC119032, BC099557
Nearest transcript distance
0
Promoter GeneID
75623
Promoter HGNC ID/MGI ID
MGI:1922873
Promoter UniProt ID
D3YUH0, D3YXN3, D3Z094, D3Z1S9, Q3TUU5
Promoter Gene Names
testis expressed 30
Promoter Gene Symbols
Tex30
Promoter Gene Synonyms
1700029F09Rik, 3110030D08Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:44159186..44159189,-;mm_5721.1
name: p5@Tex30
id: mm9::chr1:44159222..44159243,-;mm_5722.1
name: p1@Tex30
id: mm9::chr1:44159262..44159273,-;mm_5723.1
name: p4@Tex30
id: mm9::chr1:44159278..44159293,-;mm_5724.1
name: p3@Tex30
id: mm9::chr1:44159315..44159320,-;mm_5725.1
name: p6@Tex30
Overlapped refTSS TSSs
rfmm_1584.1
rfmm_1585.1
rfmm_1586.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0935192
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.2