CRE ID : FCMM_2085

CRE Name : cp1@Col3a1

Genomic Position
chr1 : 45311425 .. 45311814
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000129611.1, ENSMUST00000087883.12, ENSMUST00000189818.1, NM_009930.2, AK220558, AK013329, AK041115, AK048546, AK157762, AK159763, AK160048, AK160107, AK160818, AK159920, AK147542, AK159985, AK029212, BC052398, BC043089, AK031544, M18933
Nearest transcript distance
0
Promoter GeneID
12825
Promoter HGNC ID/MGI ID
MGI:88453
Promoter UniProt ID
Q3TVI5, Q3UH72, Q5DTG2, Q7TT32, Q8BKY2, Q8BLW4, Q9CSB7
Promoter Gene Names
collagen, type III, alpha 1
Promoter Gene Symbols
Col3a1
Promoter Gene Synonyms
Col3a-1, Tsk-2, Tsk2
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:45368469..45368483,+;mm_783.1
name: p1@Col3a1
Overlapped refTSS TSSs
rfmm_1613.1
rfmm_1614.1
rfmm_1615.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0935247
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2