CRE ID : FCMM_210

CRE Name : cp2@Pcmtd1

Genomic Position
chr1 : 7088525 .. 7089210
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000061280.16, ENSMUST00000182114.7, ENSMUST00000182306.1, ENSMUST00000182823.1, NM_183028.3, AK079468, AK166166, AK168705, BC110360, AK134223, AK168606, BC019193, AK187882, AK040848, AK166593, AK145008
Nearest transcript distance
0
Promoter GeneID
319263
Promoter HGNC ID/MGI ID
MGI:2441773
Promoter UniProt ID
Q3TGS5, S4R2K3
Promoter Gene Names
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Promoter Gene Symbols
Pcmtd1
Promoter Gene Synonyms
8430411F12Rik, A030012M09Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:7078792..7078799,-;mm_5117.1
name: mm_5117.1
id: mm9::chr1:7078821..7078863,-;mm_5118.1
name: mm_5118.1
id: mm9::chr1:7078998..7079074,+;mm_86.1
name: p2@Pcmtd1
id: mm9::chr1:7079079..7079158,+;mm_87.1
name: p1@Pcmtd1
id: mm9::chr1:7079182..7079198,+;mm_88.1
name: p5@Pcmtd1
id: mm9::chr1:7079211..7079259,+;mm_89.1
name: p3@Pcmtd1
id: mm9::chr1:7079268..7079281,+;mm_90.1
name: p4@Pcmtd1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0431487
type: pELS
id: EM10E0932377
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1