CRE ID : FCMM_2206

CRE Name : cp5@Nabp1

Genomic Position
chr1 : 51478200 .. 51478815
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000189542.6, ENSMUST00000190103.6, ENSMUST00000027279.11, ENSMUST00000186684.6, ENSMUST00000188204.6, ENSMUST00000188051.6, ENSMUST00000185534.1, ENSMUST00000188303.1, NM_028696.3, NM_001310548.1, NM_001310549.1, AK079434, AK163613, AK028886, AY880264, AK167541, AK166300, AK167652, AK051607, AK083915, AK077226, AK031015, AK049396, AK077767, AK076824, AK042351
Nearest transcript distance
0
Promoter GeneID
109019
Promoter HGNC ID/MGI ID
MGI:1923258
Promoter UniProt ID
Q3TJ87, Q8BGW5
Promoter Gene Names
nucleic acid binding protein 1
Promoter Gene Symbols
Nabp1
Promoter Gene Synonyms
4930434H03Rik, 4930442A21Rik, 4930488J04Rik, 4933440J18Rik, 5830411E10Rik, Nbp1, Obfc2a, Ssb2
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:51535234..51535250,-;mm_5777.1
name: p1@Nabp1
id: mm9::chr1:51535358..51535366,+;mm_833.1
name: mm_833.1
id: mm9::chr1:51535468..51535496,+;mm_834.1
name: mm_834.1
id: mm9::chr1:51535505..51535524,+;mm_835.1
name: mm_835.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0935439
type: PLS
Overlapped SilencerDB Silencers
MS_01323729 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.2