CRE ID : FCMM_2350

CRE Name : cp1@Gm28778,cp1@Ormdl1,cp1@Pms1

Genomic Position
chr1 : 53296855 .. 53297361
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000027267.13, ENSMUST00000135246.7, ENSMUST00000142922.1, ENSMUST00000128337.7, ENSMUST00000126590.1, ENSMUST00000126412.1, ENSMUST00000188890.1, ENSMUST00000135746.7, ENSMUST00000027266.3, ENSMUST00000190734.1, NM_153556.2, NM_145517.4, BC028939, AK140689, AK045010, AK052927, AK050385, AK077562, BC023695, BC025572, BC012315, BC023903
Nearest transcript distance
0
Promoter GeneID
227099, 227102
Promoter HGNC ID/MGI ID
MGI:1202302, MGI:2181669, MGI:5579484
Promoter Gene Names
ORM1-like 1 (S. cerevisiae), PMS1 homolog 1, mismatch repair system component, predicted gene 28778
Promoter Gene Symbols
Gm28778, Ormdl1, Pms1
Promoter Gene Synonyms
C730042F17Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:53353802..53353841,-;mm_5852.1
name: p1@Pms1
id: mm9::chr1:53353845..53353867,-;mm_5853.1
name: p2@Pms1
id: mm9::chr1:53353914..53353938,+;mm_893.1
name: p2@Ormdl1
id: mm9::chr1:53353940..53353968,+;mm_894.1
name: p1@Gm28778,p1@Ormdl1
id: mm9::chr1:53353991..53354000,+;mm_895.1
name: p3@Ormdl1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0935666
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2