CRE ID : FCMM_284

CRE Name : cp1@1700034P13Rik,cp2@Vcpip1

Genomic Position
chr1 : 9748233 .. 9748707
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000057438.6, ENSMUST00000191287.6, ENSMUST00000189431.1, ENSMUST00000207445.1, ENSMUST00000209020.1, NM_173443.3, BC059209, AK122563, AK030104, BC006059, AK144688
Nearest transcript distance
0
Promoter GeneID
70675
Promoter HGNC ID/MGI ID
MGI:1917925, MGI:1920581
Promoter UniProt ID
A0A0R4J0M9, Q05DM9, Q3UMT4, Q80T83
Promoter Gene Names
RIKEN cDNA 1700034P13 gene, valosin containing protein (p97)/p47 complex interacting protein 1
Promoter Gene Symbols
1700034P13Rik, Vcpip1
Promoter Gene Synonyms
5730421J18Rik, 5730538E15Rik, Vcip135
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:9738308..9738324,-;mm_5143.1
name: p5@Vcpip1
id: mm9::chr1:9738328..9738353,-;mm_5144.1
name: p3@Vcpip1
id: mm9::chr1:9738358..9738401,-;mm_5145.1
name: p6@Vcpip1
id: mm9::chr1:9738411..9738434,-;mm_5146.1
name: p7@Vcpip1
id: mm9::chr1:9738436..9738448,-;mm_5147.1
name: p8@Vcpip1
id: mm9::chr1:9738457..9738532,-;mm_5148.1
name: p1@Vcpip1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0431664
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1