CRE ID : FCMM_321

CRE Name : cp1@Cops5,cp2@Cspp1

Genomic Position
chr1 : 10037746 .. 10038557
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000027050.9, ENSMUST00000186528.6, ENSMUST00000188619.1, ENSMUST00000139578.7, ENSMUST00000150509.2, ENSMUST00000191296.1, ENSMUST00000190610.1, ENSMUST00000191012.6, ENSMUST00000071087.11, ENSMUST00000143606.7, ENSMUST00000191360.6, ENSMUST00000117415.7, NM_013715.2, NM_001277101.1, NR_102282.1, NM_026493.3, AK005728, AK146271, AF065386, BC046753, AF068223, AK151492, AK012499, AK002761, U70736, AK133073, AK005113, BC151042, BC019581
Nearest transcript distance
0
Promoter GeneID
211660, 26754
Promoter HGNC ID/MGI ID
MGI:1349415, MGI:2681832
Promoter Gene Names
COP9 signalosome subunit 5, centrosome and spindle pole associated protein 1
Promoter Gene Symbols
Cops5, Cspp1
Promoter Gene Synonyms
2310020J12Rik, 4930413O22Rik, COP9_complex_S5, CSN5, JUN_activation_binding_protein, Jab1, Sgn5
Overlapped FANTOM5 CAGE Peaks
id: mm10::chr1:10038208..10038228,+;mm_162268.1
name: p11@Cspp1
id: mm9::chr1:10027964..10027975,-;mm_5161.1
name: p4@Cops5
id: mm9::chr1:10028003..10028012,-;mm_5162.1
name: p3@Cops5
id: mm9::chr1:10028013..10028049,-;mm_5163.1
name: p1@Cops5
id: mm9::chr1:10028187..10028250,-;mm_5164.1
name: p2@Cops5
Overlapped refTSS TSSs
rfmm_244.1
rfmm_245.1
rfmm_246.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0431770
type: PLS
id: EM10E0932542
type: PLS
id: EM10E0932543
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1