CRE ID : FCMM_42

CRE Name : cp2@Tcea1

Genomic Position
chr1 : 4857414 .. 4857979
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000081551.13, NM_001159750.1, NM_011541.4, AK136035, BC061490, BC006022, BC083127, AK143593, M18210
Nearest transcript distance
0
Promoter GeneID
21399
Promoter HGNC ID/MGI ID
MGI:1196624
Promoter UniProt ID
Q3UPE0, Q3UWX7
Promoter Gene Names
transcription elongation factor A (SII) 1
Promoter Gene Symbols
Tcea1
Promoter Gene Synonyms
S-II
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:4847645..4847682,-;mm_5096.1
name: mm_5096.1
id: mm9::chr1:4847768..4847782,+;mm_12.1
name: p2@Tcea1
id: mm9::chr1:4847801..4847812,+;mm_13.1
name: p3@Tcea1
id: mm9::chr1:4847841..4847877,+;mm_14.1
name: p1@Tcea1
Overlapped refTSS TSSs
rfmm_42.1
rfmm_43.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0932288
type: PLS
id: EM10E0932289
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1