CRE ID : FCMM_48514

CRE Name : cp1@Cage1,cp1@Riok1

Genomic Position
chr13 : 38036894 .. 38037449
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000110233.7, ENSMUST00000074969.10, ENSMUST00000089840.4, ENSMUST00000131066.1, ENSMUST00000021866.9, ENSMUST00000223656.1, ENSMUST00000223910.1, ENSMUST00000225954.1, ENSMUST00000226006.1, ENSMUST00000224477.1, NM_027724.2, NM_024242.3, BC082568, AK016953, AK089301, AK161315, AK152707, BC006884, AK017312
Nearest transcript distance
0
Promoter GeneID
71213, 71340
Promoter HGNC ID/MGI ID
MGI:1918463, MGI:1918590
Promoter UniProt ID
A0A286YCL3, A0A286YDM8, A6X912, Q5IR70, Q922Q2
Promoter Gene Names
RIO kinase 1, cancer antigen 1
Promoter Gene Symbols
Cage1, Riok1
Promoter Gene Synonyms
3110046C13Rik, 4933427I01Rik, 5430416A05Rik, CAGE1, Ctag3
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:38128759..38128782,-;mm_116329.1
name: p3@Cage1
id: mm9::chr13:38128794..38128816,-;mm_116330.1
name: p2@Cage1
id: mm9::chr13:38128952..38129027,-;mm_116331.1
name: p1@Cage1
id: mm9::chr13:38129034..38129053,-;mm_116332.1
name: p4@Cage1
id: mm9::chr13:38129104..38129179,+;mm_113548.1
name: p1@Riok1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1004760
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2