CRE ID : FCMM_48652

CRE Name : cp1@A730081D07Rik,cp2@Pak1ip1

Genomic Position
chr13 : 41000696 .. 41001458
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000153685.1, ENSMUST00000046951.9, ENSMUST00000173238.7, ENSMUST00000174551.7, ENSMUST00000174527.7, ENSMUST00000174472.2, NR_155347.1, NM_026550.3, AK043285, AK077846, AK017959, AF386076, BC043461, BC043725, AY030406, AK002852, BC024629, AK150747, AK150919, AK135946, AK077941, BC060371, BC018522, BC116729, BC116731
Nearest transcript distance
0
Promoter GeneID
102633880, 68083
Promoter HGNC ID/MGI ID
MGI:1915333, MGI:2441825
Promoter UniProt ID
Q3UX26, Q9DCE5
Promoter Gene Names
PAK1 interacting protein 1, RIKEN cDNA A730081D07 gene
Promoter Gene Symbols
A730081D07Rik, Pak1ip1
Promoter Gene Synonyms
5830431I15Rik, 5930415H02Rik, Gdpd1, PIP1, p21-activated_protein_kinase-interacting_protein_1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:41096283..41096309,-;mm_116378.1
name: p2@A730081D07Rik
id: mm9::chr13:41096371..41096421,+;mm_113594.1
name: p2@Pak1ip1
id: mm9::chr13:41096501..41096520,-;mm_116379.1
name: p1@A730081D07Rik
id: mm9::chr13:41096600..41096617,+;mm_113595.1
name: p3@Pak1ip1
id: mm9::chr13:41096620..41096667,+;mm_113596.1
name: p1@Pak1ip1
id: mm9::chr13:41096669..41096689,+;mm_113597.1
name: p4@Pak1ip1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0557515
type: PLS
id: EM10E1356419
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2