CRE ID : FCMM_48706

CRE Name : cp3@Nedd9

Genomic Position
chr13 : 41487191 .. 41487546
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000021794.13, ENSMUST00000225053.1, ENSMUST00000224083.1, ENSMUST00000225297.1, NM_001111324.2, AK083374, AK030985, BC053713, AF009366
Nearest transcript distance
0
Promoter GeneID
18003
Promoter HGNC ID/MGI ID
MGI:97302
Promoter UniProt ID
O35177
Promoter Gene Names
neural precursor cell expressed, developmentally down-regulated gene 9
Promoter Gene Symbols
Nedd9
Promoter Gene Synonyms
Cas-L, CasL, E230025G09Rik, HEF1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:41582650..41582667,-;mm_116413.1
name: p4@Nedd9
id: mm9::chr13:41582675..41582715,-;mm_116414.1
name: p2@Nedd9
id: mm9::chr13:41582719..41582736,-;mm_116415.1
name: p3@Nedd9
Overlapped refTSS TSSs
rfmm_123251.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0557694
type: PLS
id: EM10E0557695
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2