CRE ID : FCMM_49485

CRE Name : cp3@Ptpdc1

Genomic Position
chr13 : 48625412 .. 48625872
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000035824.10, ENSMUST00000222028.1, ENSMUST00000223025.1, NM_001301781.1, NM_207232.2, AK030415, BC066081, AK038922, AK132781, AK053480, AK181547
Nearest transcript distance
0
Promoter GeneID
218232
Promoter HGNC ID/MGI ID
MGI:2145430
Promoter UniProt ID
A0A1Y7VLX3, Q6NZK8
Promoter Gene Names
protein tyrosine phosphatase domain containing 1
Promoter Gene Symbols
Ptpdc1
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:48720873..48720933,-;mm_116602.1
name: p1@Ptpdc1
id: mm9::chr13:48720940..48720963,-;mm_116603.1
name: p2@Ptpdc1
id: mm9::chr13:48720965..48720987,-;mm_116604.1
name: p4@Ptpdc1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1358660
type: PLS
Overlapped SilencerDB Silencers
MS_01340945 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.2