CRE ID : FCMM_49785

CRE Name : cp2@Sema4d

Genomic Position
chr13 : 51793474 .. 51794158
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000110040.8, ENSMUST00000021900.13, ENSMUST00000155896.1, NM_001378320.1, NM_001378317.1, NM_001378321.1, NM_001378324.1, NM_001281880.2, NM_013660.5, BC049780, AK132688
Nearest transcript distance
0
Promoter GeneID
20354
Promoter HGNC ID/MGI ID
MGI:109244
Promoter UniProt ID
O09126
Promoter Gene Names
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
Promoter Gene Symbols
Sema4d
Promoter Gene Synonyms
CD100, M-sema_G, Semacl2, Semaj, Semcl2, coll-4, semaphorin_H
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:51888902..51888911,-;mm_116746.1
name: p10@Sema4d
id: mm9::chr13:51888984..51888993,-;mm_116747.1
name: p3@Sema4d
id: mm9::chr13:51889019..51889082,-;mm_116748.1
name: p1@Sema4d

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1006881
type: PLS
id: EM10E1359477
type: pELS
id: EM10E1359478
type: pELS
Overlapped SilencerDB Silencers
MS_01340982 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2