CRE ID : FCMM_49956

CRE Name : cp1@Sptlc1

Genomic Position
chr13 : 53377187 .. 53377577
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000021920.7, ENSMUST00000221265.1, ENSMUST00000221709.1, AK089030, X95641, BC046323, AK084391, AK079578, AK028713, AK161140, AK084445, AK053207, AF003823
Nearest transcript distance
0
Promoter GeneID
268656
Promoter HGNC ID/MGI ID
MGI:1099431
Promoter UniProt ID
O35704, Q3TTW4, Q3V3Z5, Q8C295
Promoter Gene Names
serine palmitoyltransferase, long chain base subunit 1
Promoter Gene Symbols
Sptlc1
Promoter Gene Synonyms
Lcb1, Spt1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:53472724..53472742,-;mm_116789.1
name: p1@Sptlc1
Overlapped refTSS TSSs
rfmm_124095.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0561531
type: pELS
id: EM10E1007274
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.1 , Website version: v2.0.29-beta.2