CRE ID : FCMM_50096

CRE Name : cp5@4833439L19Rik

Genomic Position
chr13 : 54565132 .. 54565609
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000026989.14, ENSMUST00000153065.7, ENSMUST00000153708.1, ENSMUST00000143173.7, ENSMUST00000150938.7, ENSMUST00000143144.7, ENSMUST00000147318.1, ENSMUST00000132136.2, ENSMUST00000126295.1, NM_133797.4, NM_001252645.1, NM_001252646.1, NM_001252647.1, NM_001252648.1, AK145025, AK169399, BC043040, BC033445, BC039775, AK173126, AK167616, AK004845, AK159945, AK028697, BC054417, AK014792, AK016176, AK217762, AK177839, AK187382, AK210951, AK211316, AK217400
Nearest transcript distance
0
Promoter GeneID
97820
Promoter HGNC ID/MGI ID
MGI:1921162
Promoter UniProt ID
D3YTM8, D3YXF2, D3Z1F7, D3Z1U8, Q9DBN4
Promoter Gene Names
RIKEN cDNA 4833439L19 gene
Promoter Gene Symbols
4833439L19Rik
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:54666660..54666723,-;mm_116818.1
name: p1@4833439L19Rik
id: mm9::chr13:54666729..54666747,-;mm_116819.1
name: p2@4833439L19Rik
Overlapped refTSS TSSs
rfmm_124169.1
rfmm_124170.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1360449
type: pELS
id: EM10E1360450
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2