CRE ID : FCMM_50137

CRE Name : cp2@Rnf44

Genomic Position
chr13 : 54687985 .. 54688393
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000125871.7, ENSMUST00000150806.7, ENSMUST00000128257.7, ENSMUST00000125927.7, ENSMUST00000122935.1, ENSMUST00000134177.7, ENSMUST00000150626.1, NM_001146027.1, AK171943, AK172257
Nearest transcript distance
0
Promoter GeneID
105239
Promoter HGNC ID/MGI ID
MGI:2145310
Promoter UniProt ID
D3YXW8, D3Z261, D3Z6D0, D3Z6V1, E9PUC0, Q3UHJ8
Promoter Gene Names
ring finger protein 44
Promoter Gene Symbols
Rnf44
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:54789426..54789454,-;mm_116837.1
name: p12@Rnf44
id: mm9::chr13:54789460..54789506,-;mm_116838.1
name: p3@Rnf44
id: mm9::chr13:54789545..54789572,-;mm_116839.1
name: p6@Rnf44
id: mm9::chr13:54789607..54789624,-;mm_116840.1
name: p19@Rnf44
id: mm9::chr13:54789625..54789645,-;mm_116841.1
name: p10@Rnf44

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1007491
type: PLS
id: EM10E1007492
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2