CRE ID : FCMM_50380

CRE Name : cp6@Pdlim7

Genomic Position
chr13 : 55513243 .. 55513920
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000155098.7, ENSMUST00000153230.7, ENSMUST00000128910.7, ENSMUST00000046246.12, ENSMUST00000069968.12, ENSMUST00000069929.12, ENSMUST00000131306.7, ENSMUST00000144288.7, ENSMUST00000136583.1, NM_001114088.2, NM_001114087.2, NM_026131.4, NR_104287.1, AK033091, AK128987, AK010339, AK142933, AK167476, BC049565, AK077998, AK003019, BC052698, AK003338, AK049902, AK010141
Nearest transcript distance
0
Promoter GeneID
67399
Promoter HGNC ID/MGI ID
MGI:1914649
Promoter UniProt ID
B8JJB2, B8JJB3, Q3TJD7, Q8BVJ7
Promoter Gene Names
PDZ and LIM domain 7
Promoter Gene Symbols
Pdlim7
Promoter Gene Synonyms
1110003B01Rik, 2410002J21Rik, Enigma
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr13:55614788..55614804,-;mm_116917.1
name: p1@Pdlim7
Overlapped refTSS TSSs
rfmm_124370.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1007746
type: PLS
id: EM10E1360852
type: pELS
Overlapped SilencerDB Silencers
MS_01341051 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2