CRE ID : FCMM_698

CRE Name : cp3@Pkhd1

Genomic Position
chr1 : 20617850 .. 20618348
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000088448.11, ENSMUST00000147480.7, ENSMUST00000128051.1, NM_153179.3, AY438374, AY130764, AK052698, AK143992
Nearest transcript distance
0
Promoter GeneID
241035
Promoter HGNC ID/MGI ID
MGI:2155808
Promoter UniProt ID
E9PZ36, Q3UNU5, Q6T3A5, Q8CIS7
Promoter Gene Names
polycystic kidney and hepatic disease 1
Promoter Gene Symbols
Pkhd1
Promoter Gene Synonyms
FPC, tigmin
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:20608054..20608071,-;mm_5281.1
name: p2@Pkhd1
id: mm9::chr1:20608073..20608170,-;mm_5282.1
name: p1@Pkhd1
id: mm9::chr1:20608173..20608178,-;mm_5283.1
name: p3@Pkhd1
Overlapped refTSS TSSs
rfmm_520.1
rfmm_521.1
rfmm_522.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0432728
type: PLS
id: EM10E0432729
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1