CRE ID : FCMM_860

CRE Name : cp3@Col9a1

Genomic Position
chr1 : 24177421 .. 24177789
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000054588.14, NM_007740.3, AK031071, D17511, BC046970
Nearest transcript distance
0
Promoter GeneID
12839
Promoter HGNC ID/MGI ID
MGI:88465
Promoter UniProt ID
G3X995, Q80VN9, Q8BSQ4
Promoter Gene Names
collagen, type IX, alpha 1
Promoter Gene Symbols
Col9a1
Promoter Gene Synonyms
Col9a-1
Overlapped FANTOM5 CAGE Peaks
id: mm10::chr1:24177653..24177656,+;mm_162285.1
name: p4@Col9a1
id: mm9::chr1:24184528..24184550,+;mm_309.1
name: p2@Col9a1
Overlapped refTSS TSSs
rfmm_649.1
rfmm_650.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1