CRE ID : FCMM_862

CRE Name : cp2@Col9a1

Genomic Position
chr1 : 24195058 .. 24195425
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000088349.2, NM_001290691.1, AK160749, BC038017, AK028339, AK011547
Nearest transcript distance
0
Promoter GeneID
12839
Promoter HGNC ID/MGI ID
MGI:88465
Promoter UniProt ID
Q9D0D2
Promoter Gene Names
collagen, type IX, alpha 1
Promoter Gene Symbols
Col9a1
Promoter Gene Synonyms
Col9a-1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:24202035..24202060,+;mm_310.1
name: p3@Col9a1
id: mm9::chr1:24202069..24202110,+;mm_311.1
name: p1@Col9a1
Overlapped refTSS TSSs
rfmm_651.1
rfmm_652.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0933371
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

MoG+ UCSC Genome Browser
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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1