CRE ID : FCMM_878

CRE Name : cp3@Lmbrd1

Genomic Position
chr1 : 24678227 .. 24678869
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000191471.6, ENSMUST00000186096.6, ENSMUST00000186190.1, NM_026719.2, BC039053, BC027774, BC025579, BC031902, AK167080, AK152170, AK153237
Nearest transcript distance
0
Promoter GeneID
68421
Promoter HGNC ID/MGI ID
MGI:1915671
Promoter UniProt ID
A0A087WPS2, A0A087WS60, Q8K0B2
Promoter Gene Names
LMBR1 domain containing 1
Promoter Gene Symbols
Lmbrd1
Promoter Gene Synonyms
0910001K20Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:24685191..24685220,+;mm_317.1
name: p8@Lmbrd1
id: mm9::chr1:24685272..24685299,+;mm_318.1
name: p9@Lmbrd1
id: mm9::chr1:24685375..24685448,+;mm_319.1
name: p2@Lmbrd1
id: mm9::chr1:24685452..24685466,+;mm_320.1
name: p4@Lmbrd1
id: mm9::chr1:24685469..24685476,+;mm_321.1
name: p7@Lmbrd1
id: mm9::chr1:24685480..24685515,+;mm_322.1
name: p3@Lmbrd1
id: mm9::chr1:24685522..24685533,+;mm_323.1
name: p6@Lmbrd1
id: mm9::chr1:24685551..24685597,+;mm_324.1
name: p1@Lmbrd1
Overlapped refTSS TSSs
rfmm_668.1
rfmm_669.1
rfmm_670.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0433233
type: pELS
id: EM10E0933384
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.2