CRE ID : FCMM_96279

CRE Name : cp2@Aldh1a1,cp1@E030003E18Rik

Genomic Position
chr19 : 20492440 .. 20492957
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000224807.1, ENSMUST00000225337.2, ENSMUST00000224358.1, ENSMUST00000225313.1, ENSMUST00000225249.1, NM_001361506.1, NM_001361505.1, NM_001361504.1, NM_001361503.1, NR_015502.1, AK087651, AK086826, AK018993
Nearest transcript distance
0
Promoter GeneID
11668, 320092
Promoter HGNC ID/MGI ID
MGI:1353450, MGI:2443348
Promoter UniProt ID
A0A286YCZ0, P24549
Promoter Gene Names
RIKEN cDNA E030003E18 gene, aldehyde dehydrogenase family 1, subfamily A1
Promoter Gene Symbols
Aldh1a1, E030003E18Rik
Promoter Gene Synonyms
ALDH1, Ahd-2, Ahd2, E1, Raldh1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr19:20567067..20567078,+;mm_149679.1
name: p9@Aldh1a1
id: mm9::chr19:20567096..20567107,+;mm_149680.1
name: p6@Aldh1a1
id: mm9::chr19:20567153..20567160,+;mm_149681.1
name: p10@Aldh1a1,p7@E030003E18Rik
id: mm9::chr19:20567168..20567179,+;mm_149682.1
name: p8@Aldh1a1,p5@E030003E18Rik
id: mm9::chr19:20567184..20567237,+;mm_149683.1
name: p2@Aldh1a1,p1@E030003E18Rik
id: mm9::chr19:20567240..20567275,+;mm_149684.1
name: p3@Aldh1a1,p2@E030003E18Rik

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1075072
type: PLS
id: EM10E1474423
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2