CRE ID : FCMM_96390

CRE Name : cp2@Gm27151,cp1@Trpm3

Genomic Position
chr19 : 22447374 .. 22448315
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000183473.1, ENSMUST00000235522.1, ENSMUST00000238159.1, ENSMUST00000236372.1, ENSMUST00000238066.1, ENSMUST00000235780.1, ENSMUST00000236804.1, ENSMUST00000037901.13, NM_001362506.1, NM_001362507.1, NM_001362498.1, NM_001362504.1, NM_001362502.1, NM_001362505.1, NM_001362503.1, NM_001362500.1, NM_001362497.1, NM_177341.5, NM_001362491.1, NM_001362490.1, NM_001362499.1, NM_001362501.1, NM_001362489.1, NM_001362488.1, NM_001362487.1, HM064407, HM064408, HM064409, HM064410, HM064411, JX644970, JX644971, JX644972, JX644973, JX644974, JX644975, JX644976, JX644977, JX644978, JX644979, JX644980, JX644981, JX644982, JX644983, JX644984, JX644985, JX644986, AK044454, JF706722, BC141400, BC141412
Nearest transcript distance
0
Promoter GeneID
226025
Promoter HGNC ID/MGI ID
MGI:2443101, MGI:5520994
Promoter Gene Names
predicted gene 27151, transient receptor potential cation channel, subfamily M, member 3
Promoter Gene Symbols
Gm27151, Trpm3
Promoter Gene Synonyms
6330504P12Rik, B930001P07Rik, LTRPC3, MLSN2, melastatin_2
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr19:22522386..22522398,+;mm_149739.1
name: p8@Trpm3
id: mm9::chr19:22522497..22522530,+;mm_149740.1
name: p3@Trpm3
id: mm9::chr19:22522542..22522551,+;mm_149741.1
name: p12@Trpm3
id: mm9::chr19:22522564..22522578,+;mm_149742.1
name: p7@Trpm3
id: mm9::chr19:22522609..22522635,+;mm_149743.1
name: p4@Trpm3
id: mm9::chr19:22522668..22522686,+;mm_149744.1
name: p5@Trpm3
id: mm9::chr19:22522692..22522713,+;mm_149745.1
name: p2@Trpm3
id: mm9::chr19:22522732..22522737,+;mm_149746.1
name: p9@Trpm3

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1075280
type: pELS
id: EM10E1474803
type: PLS
id: EM10E1474804
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2