CRE ID : FCMM_96835

CRE Name : cp3@Vldlr

Genomic Position
chr19 : 27217023 .. 27217676
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000163729.1, ENSMUST00000047645.12, ENSMUST00000167487.7, ENSMUST00000025866.13, U06670, BC013622, L33417
Nearest transcript distance
0
Promoter GeneID
22359
Promoter HGNC ID/MGI ID
MGI:98935
Promoter UniProt ID
F8WGI9, F8WIN7, P98156, Q91YY0
Promoter Gene Names
very low density lipoprotein receptor
Promoter Gene Symbols
Vldlr
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm10::chr19:27217069..27217077,+;mm_165011.1
name: p10@Vldlr
id: mm9::chr19:27291501..27291532,+;mm_149936.1
name: p2@Vldlr
id: mm9::chr19:27291537..27291546,+;mm_149937.1
name: p8@Vldlr
id: mm9::chr19:27291591..27291621,+;mm_149938.1
name: p5@Vldlr
id: mm9::chr19:27291896..27291914,+;mm_149939.1
name: p4@Vldlr
id: mm9::chr19:27291999..27292095,+;mm_149940.1
name: p1@Vldlr

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1075938
type: PLS
id: EM10E1475969
type: PLS
id: EM10E1475970
type: pELS
Overlapped SilencerDB Silencers
MS_01346295 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.1 , Website version: v2.0.29-beta.2