CRE ID : FCMM_96873

CRE Name : cp4@Rfx3

Genomic Position
chr19 : 28010972 .. 28011484
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000046898.16, ENSMUST00000174850.7, ENSMUST00000172907.7, ENSMUST00000173161.1, NM_001166414.2, NM_011265.3, AK140928, BC017598, AK030008, AK041120
Nearest transcript distance
0
Promoter GeneID
19726
Promoter HGNC ID/MGI ID
MGI:106582
Promoter UniProt ID
G5E890, P48381
Promoter Gene Names
regulatory factor X, 3 (influences HLA class II expression)
Promoter Gene Symbols
Rfx3
Promoter Gene Synonyms
C230093O12Rik, MRFX3
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr19:28085485..28085544,-;mm_152920.1
name: p5@Rfx3
id: mm9::chr19:28085572..28085579,-;mm_152921.1
name: p9@Rfx3
id: mm9::chr19:28085586..28085622,-;mm_152922.1
name: p3@Rfx3
id: mm9::chr19:28085628..28085671,-;mm_152923.1
name: p1@Rfx3
id: mm9::chr19:28085676..28085711,-;mm_152924.1
name: mm_152924.1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E1075989
type: PLS
id: EM10E1075990
type: pELS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.1 , Website version: v2.0.29-beta.2