CRE ID : FCMM_991

CRE Name : cp2@Gm53209,cp3@Ptp4a1

Genomic Position
chr1 : 30949560 .. 30950156
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000233506.1, ENSMUST00000027232.14, ENSMUST00000076587.5, ENSMUST00000238874.1, NR_164183.1, AK201647, BC094447, BC031734, U84411, AK148288, BC003761, BC055039
Nearest transcript distance
0
Promoter GeneID
115487084, 19243
Promoter HGNC ID/MGI ID
MGI:1277096, MGI:6721503
Promoter UniProt ID
A0A3B2W3H6, A0A3F2YNM1, A0A5F8MQ01, B9EKL6
Promoter Gene Names
predicted gene, 53209, protein tyrosine phosphatase 4a1
Promoter Gene Symbols
Gm53209, Ptp4a1
Promoter Gene Synonyms
Prl-1
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:31006601..31006602,-;mm_5379.1
name: p1@Ptp4a1
id: mm9::chr1:31006709..31006727,+;mm_343.1
name: p1@LOC115487084
id: mm9::chr1:31006722..31006725,-;mm_5380.1
name: p14@Ptp4a1
id: mm9::chr1:31006734..31006754,+;mm_344.1
name: p3@LOC115487084
id: mm9::chr1:31006749..31006771,-;mm_5381.1
name: p6@Ptp4a1
id: mm9::chr1:31006862..31006883,-;mm_5382.1
name: p7@Ptp4a1
id: mm9::chr1:31006932..31006978,-;mm_5383.1
name: p15@Ptp4a1
id: mm9::chr1:31006986..31006999,-;mm_5384.1
name: p5@Ptp4a1

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0933465
type: PLS
Overlapped SilencerDB Silencers
MS_01323579 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

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CRE data version: v1.2.0 , Website version: v2.0.29-beta.1