CRE ID : FCMM_992

CRE Name : cp1@Gm53209

Genomic Position
chr1 : 30949878 .. 30950480
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
AK201647
Nearest transcript distance
0
Promoter GeneID
115487084
Promoter HGNC ID/MGI ID
MGI:6721503
Promoter UniProt ID
Promoter Gene Names
predicted gene, 53209
Promoter Gene Symbols
Gm53209
Promoter Gene Synonyms
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr1:31006709..31006727,+;mm_343.1
name: p1@LOC115487084
id: mm9::chr1:31006722..31006725,-;mm_5380.1
name: p14@Ptp4a1
id: mm9::chr1:31006734..31006754,+;mm_344.1
name: p3@LOC115487084
id: mm9::chr1:31006749..31006771,-;mm_5381.1
name: p6@Ptp4a1
id: mm9::chr1:31006862..31006883,-;mm_5382.1
name: p7@Ptp4a1
id: mm9::chr1:31006932..31006978,-;mm_5383.1
name: p15@Ptp4a1
id: mm9::chr1:31006986..31006999,-;mm_5384.1
name: p5@Ptp4a1
id: mm9::chr1:31007100..31007109,+;mm_345.1
name: p2@LOC115487084

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0933465
type: PLS
id: EM10E0933466
type: pELS
Overlapped SilencerDB Silencers
MS_01323579 (Embryonic stem cell)
Overlapped VISTA Enhancers

External Links

fanta.bio Logo Intrared Logo
JST Logo
NBDC Logo

Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1